Introduction to Applied Bioinformatics Course at MDIBL
October 9-14, 2014
The Applied Bioinformatics Course will provide hands-on training with major bioinformatics resources while developing a conceptual framework to foster successful application of the bioinformatic skillset to biological research. Analysis of high throughput sequencing data to identify differentially expressed genes, investigate biological functions, and predict interaction networks will be a focus. Topics covered include web-based gene and protein resources, genome browsers, DNA and RNA-Seq data analysis using CLC Genomics Workbench and the R statistical computing environment, Ingenuity® pathway analysis, gene set enrichment analyses and machine learning applications.
More information and the current agenda can be found at the course web site. Limited financial aid is available.
Science Communication Workshop Big Success
Fifteen academic, federal agency and non-profit researchers participated in a workshop led by the Alan Alda Center for Communicating Science. Participants learned techniques to improve the way they communicate their research to the public, policymakers, the media and more. Co-sponsored by the Dartmouth Superfund Research Program and NAC-SETAC.
Mt. Desert Island Marine Biological Lab and the Dartmouth SRP hosted a two-day stakeholder-driven meeting focusing on reducing the human health consequences of arsenic in the environment. Over 30 participants from state and federal government, industry, not-for profits, education organizations, media and academia worked together to craft specific long and short-term goals to address the issue.
Vivien Taylor Awarded KC Donnelly Externship
Vivien Taylor is a Postdoctoral Research Associate in the Trace Element Analysis Core working with Dr. Brian Jackson, where her research focuses on developing methods for determining mercury and arsenic species. Through this NIEHS-sponsored externship, she will expand on her current research by evaluating passive sampling techniques for measuring mercury in situ in estuaries. Passive samplers have been applied as a powerful tool for assessing the bioavailable fraction of organic contaminants, but have not been widely used for metals. This work will be conducted under the guidance of Dr. Robert Burgess from the EPA's Atlantic Ecology Division, who has expertise in developing passive sampling techniques for organic pollutants. This project will allow Vivien to develop new tools for understanding mercury behavior, and will support the Dartmouth SRP and the EPA's goals of assessing environmental exposure to contaminants.
In the News
NHPR Reports on 50,000 Wells at Risk of High Arsenic, Negative Health Impacts and Treatment Solutions
Well Water for 80,000 New Hampshire Residents May Contain Metals Exceeding Human Health Standards
The United States Geological Survey released information today regarding a study showing three-in-ten well water samples from SE NH contained metals at concentrations exceeding the US EPA drinking water standards.
USGS Release; USGS Fact Sheet; NH DES Release