Open source software for multi-modal optical molecular imaging
Publications


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    2011
    M Mastanduno, S Davis, S Jiang, R diFlorio-Alexander, B Pogue, K Paulsen, Combined Three-Dimensional Magnetic Resonance Guided Optical Spectroscopy for Functional and Molecular Imaging of Human Breast Cancer, In ECBO, 2011. [bib]
    B Pogue, S Davis, F Leblond, M Mastanduno, H Dehghani, K Paulsen, Implicit and explicit prior information in near-infrared spectral imaging: accuracy, quantification and diagnostic value, In Phil. Transactions A Math Phys Eng Sci, 2011. [bib]
    2010
    S Srinivasan, C M Carpenter, H R Ghadyani, S J Taka, P A Kaufman, R M Diflorio-Alexander, W A Wells, B W Pogue, K D Paulsen, Image guided near-infrared spectroscopy of breast tissue in vivo using boundary element method, In Journal of biomedical optics, volume 15, 2010. [bib]
    M A Mastanduno, C Carpenter, S Srinivasan, S Jiang, B W Pogue, K D Paulsen, Three-Dimensional MR-Guided Optical Spectroscopy of the Breast: Optimizing Probe Placement for Improved Image Quality, In Optical Society of America Biomed Conference, 2010. [bib]
    Z Li, V Krishnaswamy, S Jiang, S C Davis, S Srinivasan, K D Paulsen, B W Pogue, Rapid magnetic resonance-guided near-infrared mapping to image pulsatile hemoglobin in the breast, In Optics letters, volume 35, 2010. [bib]
    H R Ghadyani, S Srinivasan, M M Mastanduno, B W Pogue, K D Paulsen, Accuracy of Hemoglobin Recovery Using 3-D Image Guided Near Infrared Spectroscopy, In Optical Society of America Biomed Conference, 2010. [bib]
    J H Demers, S Srinivasan, M Isabelle, B W Pogue, M D Morris, Reconstruction of Raman Spectra Using Diffusive Light Propagation in 3-D, In Optical Society of America Biomed Conference, 2010. [bib]
    H Dehghani, I B Styles, M E Eames, B W Pogue, Optimized Wavelength Selection and Normalization in Spectral Near Infrared Tomography, In Optical Society of America Biomed Conference, 2010. [bib]
    2008
    J Wang, S C Davis, S Srinivasan, S Jiang, B W Pogue, K D Paulsen, Spectral tomography with diffuse near-infrared light: inclusion of broadband frequency domain spectral data, In J Biomed Opt., volume 13, 2008. [bib] [pdf]
    M E Eames, H Dehghani, Wavelength dependence of sensitivity in spectral diffuse optical imaging: effect of normalization on image reconstruction, In Optics Express, volume 16, 2008. [bib] [pdf]
    M E Eames, J Wang, B W Pogue, H Dehghani, Wavelength Band Optimisation in Spectral Near-Infrared Optical Tomography Improves Accuracy While Reducing Data Acquisition and Computational Burdon, In JBO, volume 13, 2008. [bib] [pdf]
    2007
    J Wang, S Davis, S Srinivasan, S Jian, B W Pogue, K D Paulsen, Localized region spectroscopy with diffuse near-infrared tomography: analysis of broadband frequency-domain spectral data, In Journal of Biomedical optics, volume 13, 2007. [bib]
    2006
    S Srinivasan, B W Pogue, H Dehghani, F Leblond, X Intes, A Data Subset Algorithm for Computationally Efficient Reconstruction of 3-D Spectral Imaging in Diffuse Optical Tomography, In Optics Express, volume 14, 2006. [bib]
    2005
    H Xu, B W Pogue, R Springett, H Dehghani, Spectral derivative based image reconstruction provides inherent insenstivity to coupling and geometric errors, In Optics Letters, volume 30, 2005. [bib] [pdf]
    S Srinivasan, B W Pogue, B Brooksby, S Jiang, H Dehghani, C Kogel, S P Poplack, K D Paulsen, Near-Infrared Characterization of Breast Tumors In Vivo using Spectrally-Constrained Reconstruction, In Technology in Cancer Research & Treatment, volume 4, 2005. [bib] [pdf]
    S Srinivasan, B W Pogue, S Jiang, H Dehghani, K D Paulsen, Spectrally constrained chromophore and scattering NIR tomography provides quantitative and robust reconstruction, In Applied Optics, volume 44, 2005. [bib]
    B Brooksby, S Srinivasan, S Jiang, H Dehghani, B W Pogue, K D Paulsen, Spectral-prior information improves Near-Infrared diffuse tomography more than spatial-prior, In Optics Letters, volume 30, 2005. [bib]