Open source software for multi-modal optical molecular imaging

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    S J Taka, S Srinivasan, NIRViz: 3D Visualization Software for Multimodality Optical Imaging Using Visualization Toolkit (VTK) and Insight Segmentation Toolkit (ITK), In Journal of digital imaging, 2011. [bib]
    S Srinivasan, B W Pogue, K D Paulsen, A Hybrid Finite Element-Boundary Element Method for Modeling Light Propagation in Tissue in 3-D, In Optical Society of America Biomed Conference, 2010. [bib]
    P K Yalavarthy, B W Pogue, H Dehghani, C M Carpenter, S Jiang, K D Paulsen, Structural information within regularization matrices improves near infrared diffuse optical tomography, In Opt. Express, volume 15, 2007. [bib]
    C M Carpenter, B W Pogue, S Jiang, H Dehghani, X Wang, K D Paulsen, W A Wells, J Forero, C Kogel, J B Weaver, S P Poplack, P A Kaufman, Image-Guided Optical Spectroscopy provides Molecular-Specific Information In Vivo: MRI-Guided Spectroscopy of Breast Cancer Hemoglobin, Water and Scatterer Size, In Opt. Lett., volume 32, 2007. [bib]
    B Brooksby, B W Pogue, S Jiang, H Dehghani, S Srinivasan, C Kogel, T D Tosteson, J Weaver, S P Poplack, K D Paulsen, Imaging Breast Adipose and Fibroglandular Tissue Molecular Signatures using Hybrid MRI-Guided Near-Infrared Spectral Tomography, In Proceedings of the National Academy of Sciences, volume 103, 2006. [bib] [pdf]
    B Brooksby, S Jiang, H Dehghani, B W Pogue, K D Paulsen, J Weaver, C Kogel, S P Poplack, Combining near infrared tomography and magnetic resonance imaging to study in vivo breast tissue: implementation of a Laplacian-type regularization to incorporate magentic reasonance structure, In J. Biomed, volume 10, 2005. [bib]
    B Brooksby, H Dehghani, B W Pogue, K D Paulsen, Near infrared (NIR) tomography breast image reconstruction with a priori structural information from MRI: algorithm development for reconstructing heterogeneities, In IEEE Journal of Selected Topics in Quantum Electronics on Lasers in Medicine and Biology, volume 9, 2003. [bib]