Nirfast

For a more comprehensive list of Nirfast publications and references, please visit these directories:

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2011
	S Srinivasan, H Ghadyani, M Jermyn, BEM-NIRFAST: Open source software for 3D Image-guided near-infrared spectroscopy using boundary element method, In ECBO, 2011. [bib]
2010
	M Malinsky, M Jermyn, B W Pogue, H Dehghani, An Online Modeling and Image Reconstruction Tool for Optical Imaging Based on NIRFAST, In Optical Society of America Biomed Conference, 2010. [bib]
	M Jermyn, B W Pogue, S Srinivasan, S Davis, H Dehghani, Algorithm for Automated Source Placement in Near-Infrared Diffuse Imaging, In Optical Society of America Biomed Conference, 2010. [bib]
	J Wang, B W Pogue, Near-infrared tomography of breast cancer hemoglobin, water, lipid, and scattering using combined frequency domain and cw measurement, In Optics Letters, volume 35, 2010. [bib]
	C M Carpenter, R Rakow-Penner, S Jiang, B W Pogue, G H Glover, K D Paulsen, Monitoring of hemodynamic changes induced in the healthy breast through inspired gas stimuli with MR-guided diffuse optical imaging, In Medical Physics, volume 37, 2010. [bib]
	J Wang, S Jiang, Z Li, R M diFlorio-Alexander, R J Barth, P A Kaufman, B W Pogue, K D Paulsen, In vivo quantitative imaging of normal and cancerous breast tissue using broadband diffuse optical tomography, In Medical Physics, volume 37, 2010. [bib]
	B W Pogue, K S Samkoe, S Hextrum, J A O'Hara, M Jermyn, S Srinivasan, T Hasan, Imaging Targeted-Agent Binding In Vivo, In Journal of Biomedical Optics Letters, volume 15, 2010. [bib]
	C M Carpenter, R Rakow-Penner, S Jiang, B L Daniel, B W Pogue, G H Glover, K D Paulsen, Inspired gas-induced vascular change in tumors with magnetic-resonance-guided near-infrared imaging: human breast pilot study, In Journal of Biomedical Optics, volume 15, 2010. [bib]
2009
	H Dehghani, M E Eames, P K Yalavarthy, S C Davis, S Srinivasan, C M Carpenter, B W Pogue, K D Paulsen, Near Infrared Optical Tomography using NIRFAST: Algorithms for Numerical Model and Image Reconstruction Algorithms, In Communications in Numerical Methods in Engineering, 2009. [bib] [pdf]
	H Dehghani, B R White, B W Zeff, A Tizzard, J P Culver, Depth sensitivity and image reconstruction analysis of dense imaging arrays for mapping brain function with diffuse optical tomography, In Applied Optics, volume 48, 2009. [bib] [pdf]
	H Dehghani, S Srinivasan, B W Pogue, A Gibson, Numerical modeling and image reconstruction in diffuse optical tomography, In Phil. Trans. R. Soc. A, 2009. [bib]
	M Chu, K Vishwanath, A D Klose, H Dehghani, Light transport in biological tissue using three-dimensional frequency-domain simplified spherical harmonics equations, In Phys. Med. Biol., volume 54, 2009. [bib] [pdf]
	S Gupta, P K Yalavarthy, D Roy, D Piao, Singular Value Decomposition based computationally efficient algorithm for rapid dynamic near-infrared diffuse optical tomography, In Med. Phys., volume 36, 2009. [bib]
	H Dehghani, S Srinivasan, B W Pogue, A Gibson, Numerical modelling and image reconstruction in diffuse optical tomography., In Philosophical Transactions of the Royal Society London, volume 367, 2009. [bib]
2008
	P K Yalavarthy, D R Lynch, B W Pogue, H Dehghani, K D Paulsen, Implementation of a computationally efficient least-squares algorithm for highly under-determined three-dimensional diffuse optical tomography problems, In Med Phys., volume 35, 2008. [bib] [pdf]
2006
	P K Yalavarthy, H Dehghani, B W Pogue, K D Paulsen, Critical computational aspects of near infrared circular tomographic imaging: Analysis of measurement number, mesh resolution and reconstruction basis, In Opt. Express, volume 14, 2006. [bib] [pdf]
2003
	M W Emaes, B W Pogue, P K Yalavarthy, H Dehghani, An efficient Jacobian reduction method for diffuse optical image reconstruction, In Applied Optics, volume 42, 2003. [bib] [pdf]