Cole Lab      
at Dartmouth

Selected Publications

Journal Articles:

Hammell, C.M., Gross, S., Zelklusen, D., Heath, C.V., Stutz, F. Moore, C. and Cole, C.N. (2002) Coupling of termination, 3’ processing and mRNA export. Submitted to Molecular and Cellular Biology, in press.

Cole, C.N. and Conzen, S.D. (2001) Polyomaviriniae: The Viruses and Their replication in FieldŐs Virology, 4th Edition. editors Knipe, D.M. and Howley, P.M. Lippincott, Williams and Wilkins, Phila, PA.

Cole, C.N. (2000) Nuclear Transport, in The Yeast Nucleus, Frontiers in Molec. Biol., ed. Fantes, P. and Beggs, J., Oxford University Press.

Cole, C.N. (2000) mRNA export: the long and winding road. Nature Cell Biol., 2: E55-58

Hodge, C.A., H.V. Colot, P. Stafford, and C.N. Cole (1999) Rat8p/Dbp5p is a shuttling transport factor that interacts with Rat7p/Nup159p and Gle1p and suppresses the mRNA export defect of xpo1-1 cells. EMBO J., 19:5778-5788

Belgareh, N., C. Snay-Hodge, F. Pasteau, S. Dagher, C.N. Cole, and V. Doye. (1998) Functional characterization of the Nup159p/Nsp1p/Nup82p nuclear pore subcomplex. Mol. Biol. Cell, 9:3475-3492.

Cole, C.N. and C.A. Hammell. (1998) Nucleocytoplasmic transport: Driving and directing transport. Curr. Biol., 8:R368-R372..

Snay-Hodge, C.A., H.V. Colot, A. L. Goldstein and C.N. Cole. (1998) Dbp5p/Rat8p is a Yeast Nuclear Pore-Associated DEAD-box Protein Essential for RNA Export. EMBO J., 17: 2663-2676.

Saavedra, C.A., C. M. Hammell, C. V. Heath, and C. N. Cole. (1997) Yeast heat shock mRNAs are exported through a distinct pathway defined by Rip1p. Genes and Devel., 11:2845-56.

Del Priore, V., C.V. Heath, C.A. Snay, A. MacMillan, L.C. Gorsch, S. Dagher, and C.N. Cole. (1997) A Structure/Function Analysis of Rat7p/Nup159p, an Essential Nucleoporin of Saccharomyces cerevisiae. J. Cell Sci, 110:2987-2999.

Conzen, S.D., C.A. Snay, and C.N. Cole. (1997) Identification of a novel anti-apoptotic functional domain in SV40 large T antigen. J. Virol., 71: 4536-4543.

Cole, C.N. and C. Saavedra. (1997) Regulation of the export of RNA from the nucleus. Sem. Cell. Devel. Biol., 8: 71-78.

Dockendorff, T.C., CV Heath, AL Goldstein, CA Snay, and CN. Cole. (1997) C-terminal truncations of the yeast nucleoporin Nup145p produce a rapid conditional mRNA export defect and alterations to nuclear structure Mol. Cell. Biol. 17:906-920.

Lu, M., SD Conzen, CN Cole, and BA Arrick. (1996) Characterization of functional mRNA splice variants of BRCA1 expressed in non-malignant and tumor-derived breast cells. Cancer Res., 56:4578-4581.

Anderson, MM, J. Chen, CN Cole, and SE Conrad. (1996) Activation of the human thymidine kinase promoter by SV40 large T antigen requires both the T antigen pRB family-binding domain and TK promoter sequences resembling E2F binding sites. J. Virol., 6304-13.

Del Priore, V., C.A. Snay, A. Bahr, and C.N. Cole (1996) Identification of RSS1, a high-copy extragenic suppressor of the rat7-1 temperature-sensitive allele of the Saccharomyces cerevisiae RAT7/NUP159 nucleoporin. Mol. Biol. Cell, 7:1601-1621.

Saavedra, C, K-S Tung, DC Amberg, AK Hopper, and CN Cole. (1996) Regulation of mRNA Export in Response to Stress in Saccharomyces cerevisiae. Genes and Devel., 10:1608-20.

Goldstein, AL, C Snay, C.V. Heath, and CN Cole (1996) Pleiotropic nuclear defects associated with a conditional allele of the novel nucleoporin Rat9p/Nup85p. Molec. Biol. Cell, 7:917-934.

Del Sal, G., EM Ruaro, R. Utrera, C.N. Cole, A.J. Levine, and C. Schneider. (1995) Gas1-induced growth suppression requires a transactivation-independent p53 function. Mol. Cell. Biol. 15:7152-60.

Heath, CV, CS Copeland, V Del Priore, M Snyder, and CN Cole. (1995) Nuclear pore complex clustering and nuclear accumulation of poly(A)+ RNA associated with mutation of the Saccharomyces cerevisiae RAT2/NUP120 gene. J Cell Biol., 131:1677-97.

Conzen, SD and CN Cole. (1995) The three transforming regions of SV40 T antigen are required for the immortalization of primary mouse embryo fibroblasts. Oncogene, 11:2295-2302.

Casaz, P., P.W. Rice, C.N. Cole, and U. Hansen. (1995) A TEF-1 independent mechanism for activation of the SV40 late promoter by mutant SV40 large T antigens. J. Virol., 69:3501-9.

Gorsch, L.C., T.C. Dockendorff, and C.N. Cole. (1995) A conditional allele of the novel repeat-containing yeast nucleoporin RAT7 / NUP159 causes both rapid cessation of mRNA export and reversible clustering of nuclear pore complexes. J. Cell Biol., 129:939-955.

Li, O., C.V. Heath, D.C. Amberg, T.C. Dockendorff, C. Copeland, M. Snyder, and C.N. Cole. (1995) Mutation or deletion of the Saccharomyces cerevisiae RAT3 / NUP133 gene causes temperature-dependent nuclear accumulation of poly(A)+ RNA and constitutive clustering of nuclear pore complexes. Mol Biol. Cell, 6:401-417.

Rajan, P., S. Swaminathan, J. Zhu, C.N. Cole, G. Barber, M.J. Tevethia, and B. Thimmapaya. (1995) A novel translation regulation function for the Simian Virus 40 large-T antigen gene. J. Virol., 69: 785-795.

Schlenstedt, G., C. Saavedra, J.D.J. Loeb, C.,N. Cole, and P.A. Silver. (1995) The GTP-bound form of the yeast Ran/TC4 homologue blocks nuclear protein import and the appearance of poly(A)+ RNA in the cytoplasm. Proc. Nat. Acad. Sci., USA. 92:225-229.

Conzen, S.D. and C.N. Cole (1994) The transforming proteins of simian virus 40. Sem. Virol., 5:349-356.

Feldherr, C., C. Cole, R.E. Lanford, and D. Akin. (1994) The effects of SV40 large T antigen and p53 on nuclear transport capacity in Balb/c 3T3 cells. Expt. Cell Res., 213: 164-171.

Quartin, R.S., C.N. Cole, J.M. Pipas, and A.J. Levine. (1994) The amino terminal functions of the SV40 large T antigen are required to overcome wild-type p53-mediated growth arrest of cells. J. Virol., 68:1334-1341.

Rice, P.W. and C.N. Cole. (1993) Efficient transcriptional activation of many simple modular promoters by simian virus 40 (SV40) large T antigen. J. Virol., 67: 6689-6697.

Amberg, D.C., M. Fleischmann, I. Stagljar, C. N. Cole, and M. Aebi. (1993). Nuclear PRP20 protein is required for mRNA export. EMBO J., 12:233-241.

Amberg, D.A., A.Goldstein, and C.N. Cole (1992) Isolation and characterization of RAT1: an essential gene of Saccharomyces cerevisiae required for the efficient nucleocytoplasmic trafficking of mRNA. Genes and Development, 6:1173-1189.

Heath, C.V., E. Fanning, and C.N. Cole. (1992) Adenovirus helper function activity of simian virus 40 T antigen mutants. Virology, 189:762-765.

Bentivoglio, C., J. Zhu, and C.N. Cole (1992) Studies on the Mechanisms of Interference with SV40 DNA replication by Trans-dominant mutants of SV40 Large T Antigen. J. Virol., 66:4209-4219.

Zhu, J., P.W. Rice, L. Gorsch, M. Abate and C.N. Cole. (1992) Transformation of a Continuous Rat Embryo Fibroblast Cell Line Requires Three Separate Domains of Simian Virus 40 Large T Antigen. J. Virol., 66:2780-2791.

Zhu, J., M. Abate, P.W. Rice, and C.N. Cole. (1991) The Ability of SV40 Large T Antigen to Immortalize Primary Mouse Embryo Fibroblasts Co-segregates with Its Ability to Bind to the Tumor Suppressor Protein, p53. J. Virol., 65:6872-6880.

Zhu, J., P. Rice, M. Chamberlain, and C.N. Cole. (1991) Mapping the Transcriptional Transactivation Function of SV40 Large T Antigen. J. Virol., 65:2778-2790.

Stacy, T.P., S. Carswell, and C.N. Cole. (1990) The growth of Simian Virus 40 (SV40) host range/adenovirus helper function mutants in an African green monkey cell line that constitutively expresses the SV40 agnoprotein. J. Virol., 64:3522-3526.

Heath. C., R. Denome and C.N. Cole. (1990) Spatial Constraints on Polyadenylation Signal Function. J. Biol. Chem., 265:9098-9104.

Stacy, T.P., M. Chamberlain, and C.N. Cole. (1989) SV40 Host Range/Helper Function (HR/HF) Mutations Cause Multiple Defects in Viral Macromolecular Synthesis. J. Virol., 63: 5208-5215.

Zhu, J. and C.N. Cole. (1989) Linker Insertion Mutants of Simian Virus 40 Large T Antigen That Show trans-Dominant interference with Wild-type Large T Antigen Map to Multiple Sites within the T-Antigen Gene. J. Virol., 63: 4777-4786.

Denome, R.M. and C.N. Cole. (1988) Patterns of polyadenylation site selection in gene constructs containing multiple polyadenylation signals. Mol. Cell. Biol., 8:4829-4839.

Tevethia, M.J., J.M. Pipas, T. Kierstead, and C. Cole. (1988) Requirements for immortalization of primary mouse embryo fibroblasts probed with mutants bearing deletions in the 3' end of SV40 gene A. Virology, 162:76-89.

Zhang, F. and C.N. Cole. (1987) Identification of a complex associated with processing and polyadenylation in vitro of HSV-1 thymidine kinase precursor RNA. Mol. Cell. Biol., 7:3277-3286.

Cole, C.N. and T.P. Stacy. (1987) Biological properties of Simian Virus 40 host range mutants lacking the COOH-terminus of large T antigen. Virology, 161:170-180.

F. Zhang, R.M. Denome, and C.N. Cole. (1986) Fine structure analysis of the processing and polyadenylation region of the herpes simplex virus type 1 thymidine kinase gene by using linker scanning, internal deletion, and insertion mutants. Mol. Cell. Biol., 6:4611-4623.

Jarvis, D.L., C.N. Cole, and J.S. Butel. (1986) Absence of a structural basis for intracellular recognition and differential localization of nuclear and plasma membrane-associated forms of Simian Virus 40 tumor antigen. Mol. Cell. Biol., 6:758-767.

Tevethia, M.J., R.W. Anderson, S.S. Tevethia, D. Simmons, J. Feunteun and C.N. Cole. (1986) Influence of amino acids encoded in the 3' open reading frame of the SV40 early region on transformation and antigenicity of large T antigen. Virology, 150:361-372.

Cole, C.N., J. Tornow, R. Clark and R. Tjian. (1986) Properties of Simian Virus 40 large T antigens encoded by SV40 mutants with deletions in gene A. J. Virol., 57:539-546.

Cole, C.N. and T.P. Stacy. (1985) Identification of sequences in the herpes simplex virus thymidine kinase gene required for efficient processing and polyadenylation. Mol. Cell. Biol., 5:2104-2113.

Tornow, J., M. Polvino-Bodnar, G. M. Santangelo and C.N. Cole. (1985) Two separable functional domains of Simian Virus 40 large T antigen: Carboxyl-terminal region of Simian Virus 40 large T antigen is required for efficient capsid protein synthesis. J. Virol., 53:415-424.

Tornow, J. and C.N. Cole. (1983) Intracistronic complementation in the Simian Virus 40 A gene. Proc. Nat. Acad. Sci., U.S.A., 80:6312-6316.

Tornow, J. and C.N. Cole. (1983) Non-viable mutants of Simian Virus 40 with deletions near the 3' ends of the A gene define a function for large T antigen required after the onset of viral DNA replication. J. Virol., 47:487-494.

Santangelo, G.M. and C.N. Cole. (1983) Preparation of a functional library of African green monkey DNA fragments which substitute for the processing/polyadenylation signal of the herpes simplex virus type 1 thymidine kinase gene. Mol. Cell. Biol., 3:643-653.

Cole, C.N. and G.M. Santangelo. (1983) Analysis in Cos-1 cells of processing and polyadenylation signals by using derivatives of the herpes simplex virus type 1 thymidine kinase gene. Mol. Cell. Biol., 3:267-279.

Polvino-Bodnar, M. and C.N. Cole. (1982) Construction and characterization of viable deletion mutants of Simian Virus 40 with deletions near the 3' end of the early region. J. Virol., 43:489-502.

van Heuverswyn, H., C.N. Cole, P. Berg, and W. Fiers. (1979) Nucleotide sequence analysis of two Simian Virus 40 mutants with deletions near the 3' end of the early region. J. Virol., 30:936-941.

Cole, C.N., L.V. Crawford and P. Berg. (1979) SV40 mutants with deletions in the 3' end of the early region are defective in adenovirus helper function. J. Virol., 30:683-691.

Contreras, R., C.N. Cole, P. Berg and W. Fiers. (1979) Nucleotide sequence analysis of two Simian Virus 40 mutants with deletions in the late region of the genome. J. Virol., 29:789-793.

Crawford, L.V., C.N. Cole, E. Paucha, A.E. Smith, K. Rundell, P. Tegtmeyer, and P. Berg. (1978) Organization and expression of the early genes of Simian Virus 40. Proc. Nat. Acad. Sci., U.S.A., 75:117-121.

Cole, C.N., T. Landers, S.P. Goff, S. Manteuil-Brutlag and P. Berg. (1977) Physical and genetic characterization of deletion mutants of Simian Virus 40 constructed in vitro. J. Virol., 24:277-294.

Cole, C.N. and D. Baltimore. (1973) Defective interfering particles of poliovirus. IV. Mechanisms of enrichment. J. Virol., 12:1414-1426.

Cole, C.N. and D. Baltimore. (1973) Defective interfering particles of poliovirus. III. Interference and enrichment. J. Mol. Biol., 76:345-361.

Cole, C.N. and D. Baltimore. (1973) Defective interfering particles of poliovirus. II. Nature of the defect. J. Mol. Biol., 76:325-343.

Cole, C.N., D. Smoler, E. Wimmer, and D. Baltimore. (1971) Defective interfering particles of poliovirus. I. Isolation and characterization. J. Virol., 7:478-485.

 

Book Chapters:

Cole, C.N. (1996) Polyomavirinae: The Viruses and Their Replication in Field's Virology, 3rd Edition. editors Fields, B.N., Knipe, D.M., and Howley, P.M. Raven Press, New York, New York.

Cole, C.N. (1975) Defective interfering particles of poliovirus. Progress in Medical Virology, 20:180-207.


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